Format the sd with the SD formatter
https://www.sdcard.org/downloads/formatter/
Then, if you want to use fat32 use guiformat
http://ridgecrop.co.uk/index.htm?guiformat.htm
https://github.com/WerWolv/ovl-sysmodules/releases
https://github.com/WerWolv/Hekate-Toolbox/releases/
Or you can simply delete the flag file in the module's folder that you want to disable.
Have you tested the 1.7.0 pre release?
If it doesn't work, thats some ips in your patches (as AMS has parsing patches disabled).
If it works, it's a Hekate "issue"