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Ahhh that makes perfect sense. I haven't had much experience with GM9 scripting so I assumed from the fact that the scripts were there in the download that it would use those. Anyway, I didn't bother to look for any newer versions in comments, so I was using the current beta which didn't yet have any attempted fix for the secret sector checks. Thanks for the reply, sorry for my late response.Standalone script runners don't run any of the scripts in the "gm9/scripts" folder. They have an "autorun.gm9" embedded directly into them. The only way to change their contents is to recompile GM9 with a new "autorun.gm9" in the data folder. It's possible that he forgot to put the checks into the copy of the script he used to generate the SSR, or that he's already fixed the SSR.